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Table 1 The numbers of samples in each cancer, tissue, and cell line type

From: SRTdb: an omnibus for human tissue and cancer-specific RNA transcripts

Type Normal tissue Tumor tissuea Cancer cell line
Adipose tissue 1204 0 0
Adrenal gland 258 79 (ACC) 0
Bladder 21 415 (BLCA) 0
Blood 929 151 (LAML) 0
Blood vessel 1335 0 0
Brain 1668 530 (LGG);169 (GBM) 65
Breast 457 1109 (BRCA) 57
Cervix 19 302 (CESC) 3
Colon 779 480 (COAD) 59
Esophagus 1434 160 (ESCA) 26
Heart 857 0 0
Kidney 89 289 (KIRP); 539 (KIRC); 65 (KICH) 32
Liver 226 372 (LIHC) 25
Lung 573 536 (LUAD); 502 (LUSC) 191
Muscle 799 0 0
Nerve 619 183 (PCPG) 16
Ovary 180 379 (OV) 47
Pancreas 328 178 (PAAD) 41
Pituitary 283 0 0
Prostate 242 500 (PRAD) 8
Salivary gland 162 0 2
Skin 1806 471 (SKCM) 56
Small intestine 187 0 1
Spleen 241 0 0
Stomach 359 375 (STAD) 37
Testis 361 156 (TGCT) 0
Thyroid 653 509 (THCA) 11
Uterus 142 56 (UCS); 552 (UCEC) 27
Vagina 156 0 0
Biliary tract 0 36 (CHOL) 8
Soft tissue 0 263 (SARC) 31
Lymphoma 0 48 (DLBC) 176
Head and Neck 0 502 (HNSC) 32
Mesothelium 0 86 (MESO) 0
Rectum 0 167 (READ) 0
Thymus 0 119 (THYM) 0
Eye 0 80 (UVM) 0
Bone 0 0 28
Pleura 0 0 11
Urinary tract 0 0 26
  1. aACC adrenocortical carcinoma, BLCA Bladder Urothelial Carcinoma, LAML Acute Myeloid Leukemia, LGG Brain Lower Grade Glioma, GBM Glioblastoma multiforme, BRCA Breast invasive carcinoma, CESC Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD Colon adenocarcinoma, ESCA Esophageal carcinoma, KIRP Kidney renal papillary cell carcinoma, KIRC Kidney renal clear cell carcinoma, KICH Kidney Chromophobe, LIHC Liver hepatocellular carcinoma, LUAD Lung adenocarcinoma, LUSC Lung squamous cell carcinoma, PCPG Pheochromocytoma and Paraganglioma, OV Ovarian serous cystadenocarcinoma, PAAD Pancreatic adenocarcinoma, PRAD Prostate adenocarcinoma, SKCM Skin Cutaneous Melanoma, STAD Stomach adenocarcinoma, TGCT Testicular Germ Cell Tumors, THCA Thyroid carcinoma, UCS Uterine Carcinosarcoma, UCEC Uterine Corpus Endometrial Carcinoma, CHOL Cholangiocarcinoma, SARC Sarcoma, DLBC Lymphoid Neoplasm Diffuse Large B-cell Lymphoma, HNSC Head and Neck squamous cell carcinoma, MESO Mesothelioma, READ Rectum adenocarcinoma, THYM Thymoma, UVM Uveal Melanoma