Table 1 The numbers of samples in each cancer, tissue, and cell line type
From: SRTdb: an omnibus for human tissue and cancer-specific RNA transcripts
Type | Normal tissue | Tumor tissuea | Cancer cell line |
|---|---|---|---|
Adipose tissue | 1204 | 0 | 0 |
Adrenal gland | 258 | 79 (ACC) | 0 |
Bladder | 21 | 415 (BLCA) | 0 |
Blood | 929 | 151 (LAML) | 0 |
Blood vessel | 1335 | 0 | 0 |
Brain | 1668 | 530 (LGG);169 (GBM) | 65 |
Breast | 457 | 1109 (BRCA) | 57 |
Cervix | 19 | 302 (CESC) | 3 |
Colon | 779 | 480 (COAD) | 59 |
Esophagus | 1434 | 160 (ESCA) | 26 |
Heart | 857 | 0 | 0 |
Kidney | 89 | 289 (KIRP); 539 (KIRC); 65 (KICH) | 32 |
Liver | 226 | 372 (LIHC) | 25 |
Lung | 573 | 536 (LUAD); 502 (LUSC) | 191 |
Muscle | 799 | 0 | 0 |
Nerve | 619 | 183 (PCPG) | 16 |
Ovary | 180 | 379 (OV) | 47 |
Pancreas | 328 | 178 (PAAD) | 41 |
Pituitary | 283 | 0 | 0 |
Prostate | 242 | 500 (PRAD) | 8 |
Salivary gland | 162 | 0 | 2 |
Skin | 1806 | 471 (SKCM) | 56 |
Small intestine | 187 | 0 | 1 |
Spleen | 241 | 0 | 0 |
Stomach | 359 | 375 (STAD) | 37 |
Testis | 361 | 156 (TGCT) | 0 |
Thyroid | 653 | 509 (THCA) | 11 |
Uterus | 142 | 56 (UCS); 552 (UCEC) | 27 |
Vagina | 156 | 0 | 0 |
Biliary tract | 0 | 36 (CHOL) | 8 |
Soft tissue | 0 | 263 (SARC) | 31 |
Lymphoma | 0 | 48 (DLBC) | 176 |
Head and Neck | 0 | 502 (HNSC) | 32 |
Mesothelium | 0 | 86 (MESO) | 0 |
Rectum | 0 | 167 (READ) | 0 |
Thymus | 0 | 119 (THYM) | 0 |
Eye | 0 | 80 (UVM) | 0 |
Bone | 0 | 0 | 28 |
Pleura | 0 | 0 | 11 |
Urinary tract | 0 | 0 | 26 |